Citation: Scholes DR, Suarez AV, Smith AA, Johnston JS, Paige KN (2014) Organ-specific patterns of endopolyploidy in the giant ant Dinoponera australis. Journal of Hymenoptera Research 37: 113–126. doi: 10.3897/JHR.37.6824
Endoreduplication is an alternative cell cycle that omits cell division such that cellular ploidy increases, generating “endopolyploidy”. Endoreduplication is common among eukaryotes and is thought to be important in generalized cell differentiation. Previous research on ants suggests that they endoreduplicate in body segment-dependent manners. In this study, we measured endopolyploidy of specific organs within ant body segments to determine which organs are driving these segment-specific patterns and whether endopolyploidy is related to organ function. We dissected fourteen organs from each of five individuals of Dinoponera australis and measured endopolyploidy of each organ via flow cytometry. Abdominal organs had higher levels of endopolyploidy than organs from the head and thorax, driven by particularly high ploidy levels for organs with digestive or exocrine function. In contrast, organs of the reproductive, muscular, and neural systems had relatively low endopolyploidy. These results provide insight into the segment-specific patterns of endopolyploidy previously reported and into the specific organs that employ endoreduplication in their functional development. Future work aimed at quantifying the metabolic and gene expression effects of endoreduplication will clarify how this often overlooked genomic event contributes to the development and function of specialized organs across the breadth of taxa that are known to endoreduplicate.
Endoreduplication, ploidy, Hymenoptera, digestion, exocrine, development
Endoreduplication is the replication of the nuclear genome without cell division such that cellular ploidy increases with each round of replication, generating endopolyploidy. This process can proceed independently among cells and create a mosaic of ploidy levels within an organism (
Given the wide range of taxa and cell types that endoreduplicate, endopolyploidy is presumed to have beneficial effects on the basic properties of the cell (
The order Hymenoptera has a long history for studies on intra-individual variation in ploidy (
What is now needed is a fine-scale survey of endopolyploidy to document the degree to which ploidy varies within the body segments, and to determine how ploidy may be differentially affecting organ development, specialization, and function. In this study, we surveyed endopolyploidy of a variety of organs within individuals of the ant Dinoponera australis (Hymenoptera: Formicidae: Ponerinae). Dinoponera australis is a large (mean 105 mg dry mass and > 2 cm in length), queenless ant that occurs in northern Argentina, Paraguay, and southern Brazil (
Initial characterization of the patterns of endopolyploidy among Dinoponera australis body segments made it possible to determine which specific organs were underlying the segment-specific patterns observed. Given the assumption that endopolyploidy is related to cellular differentiation and function (
We excavated a single colony in August 2011 from Iguazú National Park, Misiones Province, in northeastern Argentina. The colony was maintained in an insectary at the University of Illinois on a diet of sugar water and crickets. Individuals were a minimum of two years old at the time of analysis. We used carbon dioxide from sublimating dry ice to incapacitate five non-reproducing females prior to dissection. For each individual, we dissected as many organs as possible from each of the head, thorax, and abdominal segments. Dissected organs were placed in a 0.2 ml centrifuge tube on ice until preparation for cytometric analysis. A complete list of organs sampled is provided in Table 1.
Organs analyzed for nuclear DNA content by flow cytometry. Identity of the 14 organs analyzed, their abbreviations (Abbrev), the segment within which they reside, their demonstrated functions, and the number of nuclei analyzed for each organ (mean ± SE). Symbols designate reference (Ref) or general functional system (Function).
Segment | Organ | Abbrev | Function | Ref | |
---|---|---|---|---|---|
Head | Brain | BRN | Sensory processing ( |
8861 ± 1589 | |
Mandibular gland | MDG | Pheromone production ( |
287 ± 99 | ||
Mandibular muscle | MDM | Mandibular movement ( |
517 ± 141 | ||
Thorax | Foreleg muscle | FLG | Locomotion ( |
221 ± 83 | |
Thoracic muscle | THM | Locomotion ( |
1165 ± 435 | ||
Abdomen | Abdominal segmental muscle | ABM | Articulation of abdomen ( |
763 ± 272 | |
Dufour’s gland | DUF | Pheromone production ( |
384 ± 68 | ||
Fat body | FAT | Nutrient metabolism, storage ( |
704 ± 202 | ||
Foregut (crop) | FOR | Ingestion & storage ( |
1357 ± 618 | ||
Hindgut | HIN | Absorption & excretion ( |
1656 ± 313 | ||
Midgut | MID | Digestion & absorption ( |
2582 ± 916 | ||
Malpighian tubules | MPG | Excretion, osmoregulation ( |
435 ± 254 | ||
Ovaries | OVA | Egg production ( |
4305 ± 2057 | ||
Poison gland | POI | Venom production ( |
290 ± 92 |
†
‡
§
|
¶
#
†† Neural;
‡‡ exocrine;
§§ muscular;
|| digestive;
¶¶ reproduction
Flow cytometry methods were modified from those described by
Cycle value = (n2C • 0 + n4C • 1 + n8C • 2 + n16C • 3 + n32C • 4 + n64C • 5) / (n2C + n4C + n8C + n16C + n32C + n64C)
as the sum of the number of nuclei at each ploidy level multiplied by the number of endocycles required to achieve that ploidy level, divided by the total number of nuclei measured. The cycle value is interpreted as the average number of endocycles undergone per nucleus in the sample, and is thus directly proportional to endopolyploidy (
Statistical analyses were conducted as mixed models with SAS PROC MIXED (v.9.2, Cary, North Carolina, USA). To assess whether organs differed from each other across the measured ploidy levels, the proportion of nuclei at each ploidy level was compared among organs by ANOVA with individual as a random effect with five levels (individuals 1–5), ploidy level as a fixed effect with six levels (2C, 4C, 8C, 16C, 32C, 64C), and organ as a fixed effect with fourteen levels (14 organs; see Table 1). Body segments were similarly compared but with body segment as a fixed effect with three levels (head, thorax, abdomen). Additionally, to determine whether differences among body segments were due to differences in the proportion of endopolyploid cells, the proportions of endopolyploid (4C–64C) nuclei were compared among body segments via ANOVA with post-hoc linear contrasts. All proportions were arc-sin square-root transformed prior to statistical analysis to satisfy the assumption of NID(0, σ2).
To determine if endoreduplication differed among organs, the composite measure of endoreduplication, the cycle value, was compared among organs by ANOVA with individual as a random effect with five levels (individuals 1–5) and organ as a fixed effect with fourteen levels (14 organs; see Table 1). Comparing endopolyploidy via cycle values rather than across six ploidy levels individually is useful here due to the number of organs compared. Cycle values of body segments were compared similarly with body segment as a fixed effect with three levels (head, thorax, abdomen). For both the organ and body segment models, differences among organs/body segments were determined by Tukey’s Studentized range test (i.e. Tukey’s Honest Significant Difference) to correct for multiple comparisons (
To determine whether the level of endopolyploidy is correlated with organ function, cycle values were compared via ANOVA with individual as a random effect with five levels (individuals 1–5) and functional system as a fixed effect with five levels (digestive, exocrine, reproduction, muscular, neural; see Table 1 for a list of organs comprising each system). Differences among functional systems in their cycle values were determined by Tukey’s Studentized range test to correct for multiple comparisons (
We quantified nuclei via flow cytometry at ploidy levels doubling from 2C to 64C in 14 organs, though not all organs were composed of all six ploidy levels scored (Figure 1). A comparison of gated and ungated counts showed that careful preparation produced less than 2% of counts of doublets and broken or cytoplasmic tagged nuclei (data not shown). Total, ungated counts are therefore reported at each of the ploidy levels. Overall, organs vary significantly in the proportions of nuclei among the ploidy levels (F(70, 320) = 7.13, p < 0.0001; Figure 1). When assessed across all organs from each body segment, the head, thorax, and abdomen differ in their proportions of nuclei among ploidy levels (F(10, 392) = 10.33, p < 0.0001), due primarily to the abdomen having more nuclei at endopolyploid levels (4C, 8C, 16C, 32C, and 64C) than the head and thorax (abdomen vs. head 4C–64C: t(62) = 4.4, p < 0.0001; abdomen vs. thorax 4C–64C: t(62) = 5.2, p < 0.0001; Figure 2). The head and thorax do not differ in their proportion of endopolyploid nuclei (t(62) = 1.24, p = 0.2198; Figure 2).
Distribution of ploidy among organs. Percentage of nuclei at each of the ploidy levels observed (2C–64C) within each organ analyzed. Organs are presented by body segment in descending order of cycle value.
Differences in endopolyploidy among body segments. Percentage of endopolyploid (4C, 8C, 16C, 32C, and 64C) nuclei for each body segment. Shown are means ± standard error across 5 individuals. Letters indicate significant (α = 0.05) differences among body segments. Significance was determined by analysis of arc-sine square-root transformed proportions.
Organs differ overall in their cycle values (F(13, 51) = 9.57, p < 0.0001), covering a nearly 31-fold range in ploidy (brain: 0.08, Dufour’s gland: 2.47; Figure 3). Overall, these organs comprise two main statistical groups: the Dufour’s gland, midgut, Malpighian tubules, foregut, hindgut, and the mandibular gland have the highest cycle values (group A) while the fat body, ovary, poison gland, foreleg muscle, abdominal muscle, mandibular muscle, thoracic muscle, and brain have the lowest cycle values (group D), although there is some overlap in the statistical groupings for organs of intermediate cycle values (Figure 3). There is no significant relationship between the numbers of nuclei counted and the cycle values among organs (F(1, 67) = 2.03, p = 0.159; Table 1), so differences among organs in their cycle values are not likely due to differences in cell number (i.e. organ size) or technical artifact. We additionally note no significant individual effect on cycle values (F(4, 64) = 0.78, p = 0.5453), indicating that differences in cycle values are not dependent on the individual from which they were measured. When organs are considered in relation to their body segments, the abdomen has the highest cycle values (abdomen vs. head: t(62) = 2.88, p < 0.05; abdomen vs. thorax: t(62) = 3.49, p < 0.01), with no difference between cycle values of the head and thorax (t(62) = 0.88, p = 0.6532).
Cycle values for each organ analyzed within each body segment. Shown are means ± standard error across 5 replicates of each organ within each body segment. Organs are presented in descending order of mean cycle value. Bars labeled with letters denote statistical groups determined by Tukey’s Studentized range test (significance tested at αfamily = 0.05).
Upon relating organs to their functional groups (Table 1), endopolyploidy, measured by cycle value, differs among major functional systems (F(4, 60) = 11.83, p < 0.0001). Specifically, systems comprise two main statistical groups—the digestive and exocrine systems have the highest cycle values (group A), while the muscular and neural systems have the lowest cycle values (group B; Figure 4). The reproductive system has an intermediate cycle value and is shared among statistical groups (group AB). Further, while the fat body is typically considered to be part of the digestive system, it is not directly part of the ingestion/excretion pathway (i.e. the gut). Upon exclusion of the fat body from the gut (i.e. the foregut, midgut, hindgut, and Malpighian tubules), the average cycle value of the digestive system increases from a value of 1.51 with the fat body to 1.70. This exclusion changes the significance groups such that the digestive system has the highest cycle value (group A), the muscular and neural systems have the lowest (group C), and the exocrine and reproductive systems have intermediate cycle values (groups AB and BC, respectively).
Endopolyploidy of organs by functional system. Cycle value of organs within each functional system (abbreviations “Digest.”: digestive; “Reprod.”: reproductive). Shown are means ± standard error across 5 replicates of each organ within each system. Systems are presented in descending order of mean cycle value. Bars labeled with letters denote statistical groups determined by Tukey’s Studentized range test (significance tested at αfamily = 0.05). Numbers above each bar indicate the number of organs that comprise each respective system.
Previous studies have documented instances of insect endopolyploidy in a qualitative (
Our results for this unusual ant support the body segment-specific differences previously reported for four other ant species (
Patterns in segment-specific cycle values appear to be driven strongly by organ function. For example, the abdominal organs of the digestive system (and particularly the gut) and the Dufour’s gland of the exocrine system have high endopolyploidy. The mandibular gland of the exocrine system also has high endopolyploidy, yet it resides within the head, where the organs otherwise analyzed have very low endopolyploidy and serve other functions. Given endoreduplication’s presumed roles in cellular development (
The muscular tissues sampled (mandibular, foreleg, thoracic, abdominal) have comparably low levels of endopolyploidy regardless of their body segment (head, thorax, abdomen), likely due to their shared function.
Endopolyploidy is thought to be particularly important for organisms to compensate for the metabolic and genetic decrements of their small genome sizes (
Endopolyploidy is hypothesized to impact cells through associated nucleotypic effects, which are not based on the cell’s genotype, and/or genetic effects including genome or gene pathway up-regulation (
We thank Bill Wills for help with colony collection, Fred Larabee for help with colony maintenance, and Amy Gervais for help with flow cytometry. For permission to collect and export Dinoponera australis, we thank the Administración de Parques Nacionales de Argentina (specifically Parque Nacional Iguazú), Paula Cichero, Karina Schiaffino, Silvia Fabri, and CIES. The ants were imported under USDA APHIS permit number P526P-10-01369. This research was supported by grants from the National Science Foundation (DEB 1020979 to AVS and DEB 1146085 to KNP).